I dug the original aquaponics tunnel, the garden pond, and the first pit greenhouse entirely by hand. For the new pit in this thread, I did the first 1/4 with a Bobcat and the last 3/4 by hand; now I've decided to widen it, though, so by the time that's done it'll be more like 1/5 via Bobcat and 4/5 by hand. I'm pretty sure at this point that I never want to dig another one by hand again :)
I agree that it's a good idea to incorporate in some sort of climate control system. I like the buried culvert method: it's fairly easy, low cost, and would help to warm the root zone if you buried the pipe underneath the planting area. Pumping large volumes of air into my water, rather than through underground culvert piping, produces a similar effect in my aquaponics tunnel, but combining both methods would be better.
I was glad to discover that Fitch (the 'greenhouse in the snow' guy) and Stoilov (a guy doing something similar in Missouri) had employed the culvert method. I had toyed with the idea in my own mind before encountering their systems, and it's nice to see that they've had success with that method.