I don't think you can get them off the roots. I made a mistake and planted citrus seeds in them. I was not aware that citrus seeds often have 2 - 4 embryos inside. I was shocked to see one little tree and a couple days later another one a quarter inch away! We did surgery, and split the cube, nestling it next to an unpopulated split cube, and it worked fine, but getting all those roots free without breaking them would be pretty tough!
Suzi