I'm with crademan. Honey is roughly 40% fructose and 30% glucose. Chemically, it's not very different from cane sugar or high fructose corn syrup.
I'll grant you that there may be tiny amounts of beneficial micronutrients in honey, but mainlining fructose and glucose is not healthy. No doubt it gives an energy boost -- the glucose will raise your blood sugar almost immediately. Then unless you are diabetic, your body will respond by secreting insulin, which will turn the glucose into body fat. An hour or so after eating the honey (or sucrose or HFCS), as the glucose is depleted, you may find yourself faint, lethargic, perhaps even hungry.
The fructose is metabolized more slowly by your liver. Your body is designed to metabolize relatively small amounts of fructose, from wild fruit. It struggles with big doses. So for many people, much of the fructose passes through the stomach into the intestines, where it is digested by bacteria, causing gas, bloating and pain. It seems possible to me that the 1 week delay in the appearance of symptoms was an interval during which fructose-eating bacteria in your gut proliferated in response to your new fructose-rich diet.
Setting aside this preaching about nutrition, you can test whether your body is reacting to the sugars or something else (e.g., herbicides): Eat a spoonful of high fructose corn syrup. See if you have a similar reaction.